This was earlier used when the index was plaintext jsonl file. Now
that documents are indexed in a DB this func is not required.
Simplify org,md,pdf,plaintext to entries tests by removing the entry
to jsonl conversion step
- Convert extract_org_entries function to actually extract org entries
Previously it was extracting intermediary org-node objects instead
Now it extracts the org-node objects from files and converts them
into entries
- Create separate, new function to extract_org_nodes from files
- Similarly create wrapper funcs for md, pdf, plaintext to entries
- Update org, md, pdf, plaintext to entries tests to use the new
simplified wrapper function to extract org entries