Commit graph

3110 commits

Author SHA1 Message Date
Debanjum Singh Solanky
94cf3e97f3 Log app logs to file for posthoc debugging and performance analysis 2022-09-06 14:51:48 +03:00
Debanjum
0a78cd5477
Create File Filter. Improve, Consolidate Filter Code
### General Filter Improvements
- e441874 Create Abstract Base Class for all filters to inherit from
- 965bd05 Make search filters return entry ids satisfying filter
- 092b9e3 Setup Filters when configuring Text Search for each Search Type
- 31503e7 Do not pass embeddings in argument to `filter.apply` method as unused

### Create File Filter
- 7606724 Add file associated with each entry to entry dict in `org_to_jsonl` converter
- 1f9fd28 Create File Filter to filter files specified in query
- 7dd20d7 Pre-compute file to entry map in speed up file based filter
- 7e083d3 Cache results for file filters passed in query for faster filtering
- 2890b4c Simplify extracting entries satisfying file filter

### Miscellaneous
- f930324 Rename `explicit filter` to more appropriate name `word filter`
- 3707a4c Improve date filter perf. Precompute date to entry map, Cache results
2022-09-05 15:29:55 +00:00
Debanjum Singh Solanky
3707a4cdd4 Improve date filter perf. Precompute date to entry map, Cache results
- Precompute date to entry map
- Cache results for faster recall
- Log preformance timers in date filter
2022-09-05 18:21:29 +03:00
Debanjum Singh Solanky
31503e7afd Do not pass embeddings as argument to filter.apply method 2022-09-05 15:46:54 +03:00
Debanjum Singh Solanky
965bd052f1 Make search filters return entry ids satisfying filter
- Filter entries, embeddings by ids satisfying all filters in query
  func, after each filter has returned entry ids satisfying their
  individual acceptance criteria

- Previously each filter would return a filtered list of entries.
  Each filter would be applied on entries filtered by previous filters.
  This made the filtering order dependent

- Benefits
  - Filters can be applied independent of their order of execution
  - Precomputed indexes for each filter is not in danger of running
    into index out of bound errors, as filters run on original entries
    instead of on entries filtered by filters that have run before it
  - Extract entries satisfying filter only once instead of doing
    this for each filter

- Costs
  - Each filter has to process all entries even if previous filters
    may have already marked them as non-satisfactory
2022-09-05 15:21:40 +03:00
Debanjum Singh Solanky
7dd20d764c Pre-compute file to entry map in file filter to mark ids to include faster 2022-09-05 15:21:40 +03:00
Debanjum Singh Solanky
2890b4cd44 Simplify extracting entries satisfying file filter 2022-09-05 15:21:40 +03:00
Debanjum Singh Solanky
7606724dbc Add file of each entry to entry dict in org_to_jsonl converter
- This will help filter query to org content type using file filter
- Do not explicitly specify items being extracted from json of each
  entry in text_search as all text search content types do not have
  file being set in jsonl converters
2022-09-05 15:21:40 +03:00
Debanjum Singh Solanky
7e083d3e96 Cache results for file filters passed in query for faster filtering 2022-09-05 15:21:40 +03:00
Debanjum Singh Solanky
f634399f23 Convert simple file filters with no path separator into regex
- Specify just file name to get all notes associated with file at path
- E.g `query` with `file:"file1.org"` will return `entry1`
  if `entry1` is in `file1.org` at `~/notes/file.org`

- Test
  - Test converting simple file name filter to regex for path match
  - Test file filter with space in file name
2022-09-05 15:21:40 +03:00
Debanjum Singh Solanky
092b9e329d Setup Filters when configuring Text Search for each Search Type
- Allows enabling different filters for different Text Search Types
- Use FileFilter in Text Search on Org Files
2022-09-05 15:21:40 +03:00
Debanjum Singh Solanky
1f9fd28b34 Create File Filter to filter files to query. Add tests for file filter 2022-09-05 01:09:20 +03:00
Debanjum Singh Solanky
e4418746f2 Create Abstract Base Class for Filters. Make Word, Date Filter Child of BaseFilter 2022-09-04 18:48:16 +03:00
Debanjum Singh Solanky
c9f6200007 Ignore pytest_cache directory from git using .gitignore 2022-09-04 17:19:22 +03:00
Debanjum Singh Solanky
f930324350 Rename explicit filter to word filter to be more specific 2022-09-04 17:18:47 +03:00
Debanjum
d153d420fc
Improve Latency of Explicit Filter
### Goal
  - Improve explicit filter latency to work better with incremental search

### Reasons for High Explicit Filter Latency
  - Deleting entries to be excluded from existing list of entries, embeddings
  - Explicit filtering on partial words during incremental search
  - Creating word set for all entries on the fly during query
  - Deep copying of entries, embeddings before applying filter

### Improvement Details
  - **Major**
    - 191a656 Use word to entry map, list comprehension to speed up explicit filter
      - Use list comprehension and `torch.index_select` methods
        - to speed selection of entries, embedding tensors satisfying filter
        - avoid deep copy and direct manipulation of entries, embeddings
      - Use word to entry map and set operations to mark entries 
        satisfying inclusion, exclusion filters
    - c7de57b Pre-compute entry word sets to improve explicit filter query performance
    - 3308e68 Cache explicitly filtered entries, embeddings by required, blocked words
    - cdcee89 Wrap explicit filter words in quotes to trigger filter
      - E.g `+"word_to_include"` instead of `+word_to_include`
      - Signals explicit filter term completed
      - Prevents latency due to incremental search with explicit filtering on partial terms
  - **Minor**
    - 28d3dc1 Deep copy entries, embeddings in filters. Defer till actual filtering
    - 8d9f507 Load entries_by_word_set from file only once on first load of explicit filter
    - 546fad5 Use regex to check for and extract include, exclude filter words from query
    - b7d259b Test Explicit Include, Exclude Filters
    
### Results
  - Improve exclude word filter latency from **20s+ to 0.02s** on 120K line notes corpus
2022-09-04 13:55:17 +00:00
Debanjum Singh Solanky
6087862521 Use LRU helper class for explicit filter cache 2022-09-04 16:42:28 +03:00
Debanjum Singh Solanky
8f3326c8d4 Create LRU helper class for caching 2022-09-04 16:31:46 +03:00
Debanjum Singh Solanky
191a656ed7 Use word to entry map, list comprehension to speed up explicit filter
- Code Changes
  - Use list comprehension and `torch.index_select' methods
    - to speed selection of entries, embedding tensors satisfying filter
    - avoid deep copy of entries, embeddings
    - avoid updating existing lists (of entries, embeddings)

  - Use word to entry map and set operations to mark entries satisfying
    inclusion, exclusion filters

- Results
  - Speed up explicit filtering by two orders of magnitude
  - Improve consistency of speed up across inclusion and exclusion filtering
2022-09-04 15:22:35 +03:00
Debanjum Singh Solanky
28d3dc1434 Deep copy entries, embeddings in filters. Defer till actual filtering
- Only the filter knows when entries, embeddings are to be manipulated.
  So move the responsibility to deep copy before manipulating entries,
  embeddings to the filters

- Create deep copy in filters. Avoids creating deep copy of entries,
  embeddings when filter results are being loaded from cache etc
2022-09-04 02:38:57 +03:00
Debanjum Singh Solanky
3308e68edf Cache explicitly filtered entries, embeddings by required, blocked words 2022-09-04 02:38:57 +03:00
Debanjum Singh Solanky
cdcee89ae5 Wrap words in quotes to trigger explicit filter from query
- Do not run the more expensive explicit filter until the word to be
  filtered is completed by user. This requires an end sequence marker
  to identify end of explicit word filter to trigger filtering

- Space isn't a good enough delimiter as the explicit filter could be
  at the end of the query in which case no space
2022-09-04 02:38:57 +03:00
Debanjum Singh Solanky
8d9f507df3 Load entries_by_word_set from file only once on first load of explicit filter 2022-09-04 00:37:37 +03:00
Debanjum Singh Solanky
858d86075b Use regexes to check if any explicit filters in query. Test can_filter 2022-09-03 23:47:28 +03:00
Debanjum Singh Solanky
546fad570d Use regex to extract include, exclude filter words from query 2022-09-03 23:41:43 +03:00
Debanjum Singh Solanky
b7d259b1ec Test Explicit Include, Exclude Filters 2022-09-03 23:41:43 +03:00
Debanjum Singh Solanky
ffb8e3988e Use Python Logging Framework to Time Performance of Explicit Filter 2022-09-03 22:24:10 +03:00
Debanjum Singh Solanky
30c3eb372a Update Tests to Configure Filters and Setup Text Search 2022-09-03 22:24:10 +03:00
Debanjum Singh Solanky
c7de57b8ea Pre-compute entry word sets to improve explicit filter query performance 2022-09-03 16:16:31 +03:00
Debanjum Singh Solanky
094bd18e57 Use python standard logging framework for app logs
- Stop passing verbose flag around app methods
- Minor remap of verbosity levels to match python logging framework levels
  - verbose = 0 maps to logging.WARN
  - verbose = 1 maps to logging.INFO
  - verbose >=2 maps to logging.DEBUG
- Minor clean-up of app: unused modules, conversation file opening
2022-09-03 14:43:32 +03:00
Debanjum Singh Solanky
d0531c3064 Update URL QueryParam when Type set in Dropdown on Web Interface
- This also pushes the updated URL state to history
- Allows jumping back to the web interface after clicking on an image
  and having the type set to image search
- Previously type would get reset to the default search type on
  jumping back
2022-08-28 12:22:22 +03:00
Debanjum Singh Solanky
2eae32d743 Time, Log Image Search Performance 2022-08-28 00:28:46 +03:00
Debanjum Singh Solanky
c3ca99841b Scale down images to generate image embeddings faster, with less memory
- CLIP doesn't need full size images for generating embeddings with
  decent search results. The sentence transformers docs use images
  scaled to 640px width

- Benefits
  - Normalize image sizes
  - Increase image embeddings generation speed
  - Decrease memory usage while generating embeddings from images
2022-08-24 14:09:02 +03:00
Debanjum Singh Solanky
ea4fdd9134 Fix logic to ignore notes with no body. Add tests to prevent regression
- Notes with empty newlines in body were not being ignored
- Add regression tests to avoid above regression in org_to_jsonl conversion
2022-08-21 19:41:40 +03:00
Debanjum Singh Solanky
5e107eedc0 Rename test_asymmetric_search to now more appropriate test_text_search 2022-08-21 18:36:14 +03:00
Debanjum
144986ebfd
Fix, Improve Desktop GUI Splash Screen and Main Window
- 5e6625a Fix file browser to not add empty line when no file/dir selected
- 8098b8c Bring main window to Top when open from System Tray
- 1c122a8 Place window near top so buttons are not hidden by OS bottom bar
- dfe2546 Set Khoj Icon on Main Desktop Window
- 1b1f8f9 Move Splash screen text below icon. Set the text color to black
- 450f644 Fix path to remove shared libraries when packaging the Windows app
2022-08-20 23:19:01 +00:00
Debanjum
d6f624dc75
Use MPS, CUDA to GPU Accelerate Query Performance
- Load Models and Embeddings onto GPU if available
- Use MPS for GPU acceleration when available
  - Note: Support for [MPS](https://developer.apple.com/metal/) in Pytorch is currently in v1.13.0 nightly builds. See [Announcement](https://pytorch.org/blog/introducing-accelerated-pytorch-training-on-mac/)
  - Users will have to wait for PyTorch MPS support to land in stable builds
  - Until then code can be tuned and tested for GPU acceleration on newer Macs
- Re-enable Tests for Image Search
2022-08-20 23:16:44 +00:00
Debanjum Singh Solanky
5e6625ac68 Fix file browser to not add empty line when no file/dir selected
- When no file selected in file browser an empty line/entry gets added
  to input entries list
- Bug got introduced due to insufficient update on change to add
  instead of insert
- Update is_none_or_empty helper method to also check for empty string
2022-08-21 02:03:28 +03:00
Debanjum Singh Solanky
8098b8c3a8 Bring Configure Window to Top when Opened from System Tray
- Previously the window could get hidden behind other app windows when
  user clicked configure from the system tray
2022-08-20 23:38:43 +03:00
Debanjum Singh Solanky
1c122a8a91 Place window near top so buttons are not hidden by OS bottom bar 2022-08-20 22:38:06 +03:00
Debanjum Singh Solanky
dfe2546c04 Set Khoj Icon on Main Desktop Window 2022-08-20 20:36:15 +03:00
Debanjum Singh Solanky
1b1f8f9272 Move Splash screen text below icon. Set the text color to black
- It is currently on top of the splash screen icon
- Ballpark pixels to move such that text positioned below icon
- Test later to verify if text is positioned fine now
2022-08-20 20:32:31 +03:00
Debanjum Singh Solanky
450f6441e2 Fix path to remove shared libraries when packaging the Windows app 2022-08-20 20:29:33 +03:00
Debanjum Singh Solanky
e6abe76875 Upgrade torch, torchvision package versions 2022-08-20 14:45:43 +03:00
Debanjum Singh Solanky
972523e8a9 Re-enable tests for image search
Verify if recent fixes resolve test flakiness
2022-08-20 14:44:53 +03:00
Debanjum Singh Solanky
82d2891765 Do not pass ML compute `device' around as argument to search funcs
- It is a non-user configurable, app state that is set on app start
- Reduce passing unneeded arguments around. Just set device where
  required by looking for ML compute device in global state
2022-08-20 14:44:53 +03:00
Debanjum Singh Solanky
acc9091260 Use MPS on Apple Mac M1 to GPU accelerate Encode, Query Performance
- Note: Support for MPS in Pytorch is currently in v1.13.0 nightly builds
  - Users will have to wait for PyTorch MPS support to land in stable builds
- Until then the code can be tweaked and tested to make use of the GPU
  acceleration on newer Macs
2022-08-20 14:44:06 +03:00
Debanjum Singh Solanky
7de9c58a1c Load models, corpus embeddings onto GPU device for text search, if available
- Pass device to load models onto from app state.
  - SentenceTransformer models accept device to load models onto during initialization
- Pass device to load corpus embeddings onto from app state
2022-08-20 14:04:18 +03:00
Debanjum Singh Solanky
7fe3e844d2 Fix setup of Reproducible Build environment in publish workflow
- Note: Reproducible builds have not been validated.
  This is just preliminary work to get there.
  Further testing and fixes maybe required
2022-08-19 21:00:12 +03:00
Debanjum Singh Solanky
dc8dcc94a6 Bump Khoj.el package version to 0.1.6 2022-08-19 20:48:42 +03:00