/***************************************************************************** * * This file is part of Mapnik (c++ mapping toolkit) * * Copyright (C) 2015 Artem Pavlenko * * This library is free software; you can redistribute it and/or * modify it under the terms of the GNU Lesser General Public * License as published by the Free Software Foundation; either * version 2.1 of the License, or (at your option) any later version. * * This library is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU * Lesser General Public License for more details. * * You should have received a copy of the GNU Lesser General Public * License along with this library; if not, write to the Free Software * Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA * *****************************************************************************/ #include "csv_utils.hpp" #include "csv_datasource.hpp" #include "csv_featureset.hpp" #include "csv_inline_featureset.hpp" #include "csv_index_featureset.hpp" // boost #include // mapnik #include #include #include #include #include #include #include #include #include #include #include #include #include #ifdef CSV_MEMORY_MAPPED_FILE #include #include #include #endif // stl #include #include #include #include #include using mapnik::datasource; using mapnik::parameters; DATASOURCE_PLUGIN(csv_datasource) csv_datasource::csv_datasource(parameters const& params) : datasource(params), desc_(csv_datasource::name(), *params.get("encoding", "utf-8")), extent_(), filename_(), row_limit_(*params.get("row_limit", 0)), inline_string_(), escape_(*params.get("escape", "")), separator_(*params.get("separator", "")), quote_(*params.get("quote", "")), headers_(), manual_headers_(mapnik::util::trim_copy(*params.get("headers", ""))), strict_(*params.get("strict", false)), ctx_(std::make_shared()), extent_initialized_(false), tree_(nullptr), locator_(), has_disk_index_(false) { boost::optional ext = params.get("extent"); if (ext && !ext->empty()) { extent_initialized_ = extent_.from_string(*ext); } boost::optional inline_string = params.get("inline"); if (inline_string) { inline_string_ = *inline_string; } else { boost::optional file = params.get("file"); if (!file) throw mapnik::datasource_exception("CSV Plugin: missing parameter"); boost::optional base = params.get("base"); if (base) filename_ = *base + "/" + *file; else filename_ = *file; has_disk_index_ = mapnik::util::exists(filename_ + ".index"); } if (!inline_string_.empty()) { std::istringstream in(inline_string_); parse_csv(in, escape_, separator_, quote_); } else { #if defined (CSV_MEMORY_MAPPED_FILE) using file_source_type = boost::interprocess::ibufferstream; file_source_type in; mapnik::mapped_region_ptr mapped_region; boost::optional memory = mapnik::mapped_memory_cache::instance().find(filename_, true); if (memory) { mapped_region = *memory; in.buffer(static_cast(mapped_region->get_address()),mapped_region->get_size()); } else { throw std::runtime_error("could not create file mapping for " + filename_); } #elif defined (_WINDOWS) std::ifstream in(mapnik::utf8_to_utf16(filename_),std::ios_base::in | std::ios_base::binary); if (!in.is_open()) { throw mapnik::datasource_exception("CSV Plugin: could not open: '" + filename_ + "'"); } #else std::ifstream in(filename_.c_str(),std::ios_base::in | std::ios_base::binary); if (!in.is_open()) { throw mapnik::datasource_exception("CSV Plugin: could not open: '" + filename_ + "'"); } #endif parse_csv(in, escape_, separator_, quote_); if (has_disk_index_ && !extent_initialized_) { // read bounding box from *.index using value_type = std::pair; std::ifstream index(filename_ + ".index", std::ios::binary); if (!index) throw mapnik::datasource_exception("CSV Plugin: could not open: '" + filename_ + ".index'"); extent_ = mapnik::util::spatial_index::bounding_box(index); } //in.close(); no need to call close, rely on dtor } } csv_datasource::~csv_datasource() {} template void csv_datasource::parse_csv(T & stream, std::string const& escape, std::string const& separator, std::string const& quote) { auto file_length = detail::file_length(stream); // set back to start stream.seekg(0, std::ios::beg); char newline; bool has_newline; std::tie(newline, has_newline) = detail::autodect_newline(stream, file_length); // set back to start stream.seekg(0, std::ios::beg); // get first line std::string csv_line; std::getline(stream,csv_line,stream.widen(newline)); // if user has not passed a separator manually // then attempt to detect by reading first line std::string sep = mapnik::util::trim_copy(separator); if (sep.empty()) sep = detail::detect_separator(csv_line); separator_ = sep; // set back to start stream.seekg(0, std::ios::beg); std::string esc = mapnik::util::trim_copy(escape); if (esc.empty()) esc = "\\"; std::string quo = mapnik::util::trim_copy(quote); if (quo.empty()) quo = "\""; MAPNIK_LOG_DEBUG(csv) << "csv_datasource: csv grammar: sep: '" << sep << "' quo: '" << quo << "' esc: '" << esc << "'"; int line_number = 1; if (!manual_headers_.empty()) { std::size_t index = 0; auto headers = csv_utils::parse_line(manual_headers_, sep); for (auto const& header : headers) { std::string val = mapnik::util::trim_copy(header); detail::locate_geometry_column(val, index++, locator_); headers_.push_back(val); } } else // parse first line as headers { while (std::getline(stream,csv_line,stream.widen(newline))) { try { auto headers = csv_utils::parse_line(csv_line, sep); // skip blank lines std::string val; if (headers.size() > 0 && headers[0].empty()) ++line_number; else { std::size_t index = 0; for (auto const& header : headers) { val = mapnik::util::trim_copy(header); if (val.empty()) { if (strict_) { std::ostringstream s; s << "CSV Plugin: expected a column header at line "; s << line_number << ", column " << index; s << " - ensure this row contains valid header fields: '"; s << csv_line << "'\n"; throw mapnik::datasource_exception(s.str()); } else { // create a placeholder for the empty header std::ostringstream s; s << "_" << index; headers_.push_back(s.str()); } } else { detail::locate_geometry_column(val, index, locator_); headers_.push_back(val); } ++index; } ++line_number; break; } } catch (std::exception const& ex) { std::string s("CSV Plugin: error parsing headers: "); s += ex.what(); throw mapnik::datasource_exception(s); } } } if (locator_.type == detail::geometry_column_locator::UNKNOWN) { throw mapnik::datasource_exception("CSV Plugin: could not detect column headers with the name of wkt, geojson, x/y, or " "latitude/longitude - this is required for reading geometry data"); } mapnik::value_integer feature_count = 0; bool extent_started = false; std::size_t num_headers = headers_.size(); std::for_each(headers_.begin(), headers_.end(), [ & ](std::string const& header){ ctx_->push(header); }); mapnik::transcoder tr(desc_.get_encoding()); auto pos = stream.tellg(); // handle rare case of a single line of data and user-provided headers // where a lack of a newline will mean that std::getline returns false bool is_first_row = false; if (!has_newline) { stream.setstate(std::ios::failbit); pos = 0; if (!csv_line.empty()) { is_first_row = true; } } if (has_disk_index_) return; std::vector boxes; while (is_first_row || std::getline(stream, csv_line, stream.widen(newline))) { if ((row_limit_ > 0) && (line_number++ > row_limit_)) { MAPNIK_LOG_DEBUG(csv) << "csv_datasource: row limit hit, exiting at feature: " << feature_count; break; } auto record_offset = pos; auto record_size = csv_line.length(); pos = stream.tellg(); is_first_row = false; // skip blank lines unsigned line_length = csv_line.length(); if (line_length <= 10) { std::string trimmed = csv_line; boost::trim_if(trimmed,boost::algorithm::is_any_of("\",'\r\n ")); if (trimmed.empty()) { MAPNIK_LOG_DEBUG(csv) << "csv_datasource: empty row encountered at line: " << line_number; continue; } } try { auto values = csv_utils::parse_line(csv_line, sep); unsigned num_fields = values.size(); if (num_fields > num_headers) { std::ostringstream s; s << "CSV Plugin: # of columns(" << num_fields << ") > # of headers(" << num_headers << ") parsed for row " << line_number << "\n"; throw mapnik::datasource_exception(s.str()); } else if (num_fields < num_headers) { std::ostringstream s; s << "CSV Plugin: # of headers(" << num_headers << ") > # of columns(" << num_fields << ") parsed for row " << line_number << "\n"; throw mapnik::datasource_exception(s.str()); } auto geom = detail::extract_geometry(values, locator_); if (!geom.is()) { auto box = mapnik::geometry::envelope(geom); boxes.emplace_back(std::move(box), make_pair(record_offset, record_size)); if (!extent_initialized_) { if (!extent_started) { extent_started = true; extent_ = mapnik::geometry::envelope(geom); } else { extent_.expand_to_include(mapnik::geometry::envelope(geom)); } } if (++feature_count != 1) continue; auto beg = values.begin(); auto end = values.end(); for (std::size_t i = 0; i < num_headers; ++i) { std::string const& header = headers_.at(i); if (beg == end) // there are more headers than column values for this row { // add an empty string here to represent a missing value // not using null type here since nulls are not a csv thing if (feature_count == 1) { desc_.add_descriptor(mapnik::attribute_descriptor(header, mapnik::String)); } // continue here instead of break so that all missing values are // encoded consistenly as empty strings continue; } std::string value = mapnik::util::trim_copy(*beg++); int value_length = value.length(); if (locator_.index == i && (locator_.type == detail::geometry_column_locator::WKT || locator_.type == detail::geometry_column_locator::GEOJSON)) continue; // First we detect likely strings, // then try parsing likely numbers, // then try converting to bool, // finally falling back to string type. // An empty string or a string of "null" will be parsed // as a string rather than a true null value. // Likely strings are either empty values, very long values // or values with leading zeros like 001 (which are not safe // to assume are numbers) bool matched = false; bool has_dot = value.find(".") != std::string::npos; if (value.empty() || (value_length > 20) || (value_length > 1 && !has_dot && value[0] == '0')) { matched = true; desc_.add_descriptor(mapnik::attribute_descriptor(header, mapnik::String)); } else if (csv_utils::is_likely_number(value)) { bool has_e = value.find("e") != std::string::npos; if (has_dot || has_e) { double float_val = 0.0; if (mapnik::util::string2double(value,float_val)) { matched = true; desc_.add_descriptor(mapnik::attribute_descriptor(header,mapnik::Double)); } } else { mapnik::value_integer int_val = 0; if (mapnik::util::string2int(value,int_val)) { matched = true; desc_.add_descriptor(mapnik::attribute_descriptor(header,mapnik::Integer)); } } } if (!matched) { // NOTE: we don't use mapnik::util::string2bool // here because we don't want to treat 'on' and 'off' // as booleans, only 'true' and 'false' if (csv_utils::ignore_case_equal(value, "true") || csv_utils::ignore_case_equal(value, "false")) { desc_.add_descriptor(mapnik::attribute_descriptor(header, mapnik::Boolean)); } else // fallback to normal string { desc_.add_descriptor(mapnik::attribute_descriptor(header, mapnik::String)); } } } } else { std::ostringstream s; s << "CSV Plugin: expected geometry column: could not parse row " << line_number << " " << values[locator_.index] << "'"; throw mapnik::datasource_exception(s.str()); } } catch (mapnik::datasource_exception const& ex ) { if (strict_) throw ex; else { MAPNIK_LOG_ERROR(csv) << ex.what(); } } catch (std::exception const& ex) { std::ostringstream s; s << "CSV Plugin: unexpected error parsing line: " << line_number << " - found " << headers_.size() << " with values like: " << csv_line << "\n" << " and got error like: " << ex.what(); if (strict_) { throw mapnik::datasource_exception(s.str()); } else { MAPNIK_LOG_ERROR(csv) << s.str(); } } } // bulk insert initialise r-tree tree_ = std::make_unique(boxes); } const char * csv_datasource::name() { return "csv"; } datasource::datasource_t csv_datasource::type() const { return datasource::Vector; } mapnik::box2d csv_datasource::envelope() const { return extent_; } mapnik::layer_descriptor csv_datasource::get_descriptor() const { return desc_; } template boost::optional csv_datasource::get_geometry_type_impl(T & stream) const { boost::optional result; int multi_type = 0; auto itr = tree_->qbegin(boost::geometry::index::intersects(extent_)); auto end = tree_->qend(); for (std::size_t count = 0; itr !=end && count < 5; ++itr, ++count) { csv_datasource::item_type const& item = *itr; std::size_t file_offset = item.second.first; std::size_t size = item.second.second; stream.seekg(file_offset); std::vector record; record.resize(size); stream.read(record.data(), size); std::string str(record.begin(), record.end()); try { auto values = csv_utils::parse_line(str, separator_); auto geom = detail::extract_geometry(values, locator_); result = mapnik::util::to_ds_type(geom); if (result) { int type = static_cast(*result); if (multi_type > 0 && multi_type != type) { result.reset(mapnik::datasource_geometry_t::Collection); return result; } multi_type = type; } } catch (std::exception const& ex) { if (strict_) throw ex; else MAPNIK_LOG_ERROR(csv) << ex.what(); } } return result; } boost::optional csv_datasource::get_geometry_type() const { if (inline_string_.empty()) { #if defined (_WINDOWS) std::ifstream in(mapnik::utf8_to_utf16(filename_),std::ios_base::in | std::ios_base::binary); #else std::ifstream in(filename_.c_str(),std::ios_base::in | std::ios_base::binary); #endif if (!in.is_open()) { throw mapnik::datasource_exception("CSV Plugin: could not open: '" + filename_ + "'"); } return get_geometry_type_impl(in); } else { std::stringstream in(inline_string_); return get_geometry_type_impl(in); } } mapnik::featureset_ptr csv_datasource::features(mapnik::query const& q) const { for (auto const& name : q.property_names()) { bool found_name = false; for (auto const& header : headers_) { if (header == name) { found_name = true; break; } } if (!found_name) { std::ostringstream s; s << "CSV Plugin: no attribute '" << name << "'. Valid attributes are: " << boost::algorithm::join(headers_, ",") << "."; throw mapnik::datasource_exception(s.str()); } } mapnik::box2d const& box = q.get_bbox(); if (extent_.intersects(box)) { if (tree_) { csv_featureset::array_type index_array; tree_->query(boost::geometry::index::intersects(box),std::back_inserter(index_array)); std::sort(index_array.begin(),index_array.end(), [] (item_type const& item0, item_type const& item1) { return item0.second.first < item1.second.first; }); if (inline_string_.empty()) { return std::make_shared(filename_, locator_, separator_, headers_, ctx_, std::move(index_array)); } else { return std::make_shared(inline_string_, locator_, separator_, headers_, ctx_, std::move(index_array)); } } else if (has_disk_index_) { mapnik::filter_in_box filter(q.get_bbox()); return std::make_shared(filename_, filter, locator_, separator_, headers_, ctx_); } } return mapnik::featureset_ptr(); } mapnik::featureset_ptr csv_datasource::features_at_point(mapnik::coord2d const& pt, double tol) const { mapnik::box2d query_bbox(pt, pt); query_bbox.pad(tol); mapnik::query q(query_bbox); std::vector const& desc = desc_.get_descriptors(); for (auto const& item : desc) { q.add_property_name(item.get_name()); } return features(q); }